Publikace

He, S., Chakraborty, A. , Li, F., Zhou, C., Zhang, B., Chen, B., & Jiang, B. (2023). Genome-wide identification reveals conserved carbohydrate-active enzyme repertoire in termites.
Gothandapani, S., Naseer, A., Hradecky, J., Chakraborty, A. , Synek, J., Modlinger, R., & Roy, A. Gene Expression Plasticity Facilitates Different Host Feeding in Ips Sexdentatus (Coleoptera: Curculionidae: Scolytinae). Available at SSRN 4588305 .
Singh, A., Yadav, M., Panwar, R., Rustagi, A., Chakraborty, A. , Roy, A., & Singh, IK Comprehensive and evolutionary analysis of Spodoptera litura-inducible Cytochrome P450 monooxygenase gene family in Glycine max elucidate their role in defense. Frontiers in Plant Science , 14 , 1221526.
Gupta , S., Chakraborty, A., & Roy, A. (2023). Prospects for deploying microbes against tree-killing beetles (Coleoptera) in Anthropocene. Frontiers in Forests and Global Change , 6 , 1182834.
Chakraborty, A. , Purohit, A., Khara, A., Modlinger, R., & Roy, A. (2023). Life-stage and geographic location determine the microbial assemblage in Eurasian spruce bark beetle, Ips typographus L. (Coleoptera: Curculionidae). Frontiers in Forests and Global Change , 6 , 1176160.
Saxena, H., Negi, H., Keshan, R., Chitkara, P., Kumar, S., Chakraborty, A. , ... & Singh, A. (2023). A comprehensive investigation of lipid-transfer proteins from Cicer arietinum disentangles their role in plant defense against Helicoverpa armigera-infestation. Frontiers in Genetics , 14 .
Chakraborty, A., Zádrapová, D., Dvořák, J., Faltinová, Z., Žaček, P., Cajthaml, T., ... & Roy, A. (2023). Impact of 30 years precipitation regime differences on forest soil physiology and microbial assemblages. Frontiers in Forests and Global Change , 6 , 1142979.
Chakraborty, A. , Šobotník, J., Votýpková, K., Hradecký, J., Stiblik, P., Synek, J., ... & Větrovský, T. (2023). Impact of Wood Age on Termite Microbial Assemblages. Applied and Environmental Microbiology , 89 (5), e00361-23.
Naidu, S., Pandey, J., Mishra, L. C., Chakraborty, A. , Roy, A., Singh, I. K., & Singh, A. (2023). Silicon nanoparticles: Synthesis, uptake and their role in mitigation of biotic stress. Ecotoxicology and Environmental Safety , 255 , 114783.
Bhar, A., Chakraborty, A. , & Roy, A. (2023). The captivating role of calcium in plant-microbe interaction. Frontiers in Plant Science , 14 , 1138252.
Mogilicherla, K., Chakraborty, A. , Taning, NTC, Smagghe, G., & Roy, A. (2023). RNAi in termites (Isoptera): Current status and prospects for pest management. Entomologia Generalis , 43 (1), 55-68.
He, S., Jiang, B., Chakraborty, A. , & Yu, G. (2022). The Evolution of Glycoside Hydrolase Family 1 in Insects Related to Their Adaptation to Plant Utilization. Insects , 13 (9), 786.
Chakraborty, A. , Mori, B., Rehermann, G., Hernández Garcia, A., Lemmen‐Lechelt, J., Hagman, A., ... & Becher, PG (2022). Yeast and fruit fly mutual niche construction and antagonism against mould. Functional Ecology , 36 (7), 1639-1654.
Yadav, M., Pandey, J., Chakraborty, A. , Hassan, MI, Kundu, JK, Roy, A., ... & Singh, A. (2022). A comprehensive analysis of calmodulin-like proteins of glycine max indicates their role in calcium signaling and plant defense against insect attack. Frontiers in plant science , 13 , 817950.
Singh, A., Mehta, S., Yadav, S., Nagar, G., Ghosh, R., Roy, A., Chakraborty, A. , & Singh, IK (2022). How to cope with the challenges of environmental stresses in the era of global climate change: An update on ROS status off in plants. International Journal of Molecular Sciences , 23 (4), 1995.
Bhar, A., Chakraborty, A. , & Roy, A. (2021) Plant responses to biotic stress: old memories matter. Plants, 11: 84.
Singh, S., Singh, A., Baweja, V., Roy, A., Chakraborty, A. , & Singh, IK (2021). Molecular Rationale of Insect-Microbes Symbiosis—From Insect Behavior to Mechanism. Microorganisms , 9 (12), 2422.
Sellamuthu, G., Amin, S., White, J., Synek, J., Modlinger, R., Sen, MK, Chakraborty, A. , & Roy, A. (2021). Reference gene selection for normalizing gene expression in Ips sexdentatus (Coleoptera: Curculionidae: Scolytinae) under different experimental conditions. Frontiers in Physiology , 12 , 752768.
Powell, D., Groβe-Wilde, E., Krokene, P., Roy, A., Chakraborty, A. , Löfstedt, C., ... & Schlyter, F. (2021). A highly-contiguous genome assembly of the Eurasian spruce bark beetle, Ips typographus, provides insight into a major forest pest. Communications biology , 4 (1), 1059.
Mehta, S., Chakraborty, A. , Roy, A., Singh, IK, & Singh, A. (2021). Fight hard or die trying: current status of lipid signaling during plant–pathogen interaction. Plants , 10 (6), 1098.
Soukup, P., Větrovský, T., Stiblik, P., Votýpková, K. Chakraborty, A. , Sillam-Dussès, D, .... Šobotník, J. Bourguignon, T. (2020). Termites are associated with external species-specific bacterial communities. Applied and Environmental Microbiology, DOI: 10.1128 / AEM.02042-20 ( Q1 , Impact Factor- 3.96)
Chakraborty, A. , Ashraf MH Mödlinger R. Synek J. Schlyter, F., & Roy, A. (2020). Unraveling the gut bacteriome of Ips (Coleoptera: Curculionidae: Scolytinae): identifying core bacterial assemblage and their ecological relevance. Scientific reports, 10 (1), 1-17. ( Q1, Impact Factor- 4.12)
Větrovský, T., Soukup, P., Stiblik, P., Votýpková, K., Chakraborty, A., Larrañaga IO ... & Šobotník, J. (2020). Termites host specific fungal communities that differ from those in their ambient environments. Fungal Ecology, 48, 100991. ( Q1 , Impact Factor- 3.95)
Chakraborty, A., Modlinger, R., Ashraf, M.Z., Synek, J., Schlyter, F., & Roy, A. (2020). Core mycobiome and their ecological relevance in the gut of five ips bark beetles (Coleoptera: Curculionidae: Scolytinae). Frontiers in microbiology, 11, 2134. ( Q1 , Impact Factor-4.19)
Mbark, S., Skalicky, M. Talbi, A., Chakraborty, A. , Hnilička, F. Hejnák, V., ... & Abdelly, C. (2020). Performance of Medicago sativa Grown in Clay Soil Favored by Compost or Farmyard Manure to Mitigate Salt Stress. Agronomy, 10 (1), 94 ( Q1 , Impact Factor 2.603).
Ljunggren J, Borrero-Echeverry F, Chakraborty A , Lindblom T, Hedenström T, Karlsson M, Witzgall P, Bengtsson M. Yeast volatomes differentially effect larval feeding in an insect herbivore. Applied and Environmental Microbiology, 85 (21), e01761-19 (2019) ( Q1 , Impact Factor- 3.96)
Becher P, Hagman A, Verschut V, Chakraborty A , Rozpedowska E, Lebreton S, Bengtsson M, Flick G, Witzgall P, Piškur J. (2018) . Chemical signaling and insect attraction is a conserved trait in yeasts . Ecology and Evolution. DOI10.1002/ece3 .39 05). ( Q1 , Impact Factor- 2.54 )
Chakraborty, A. , Chakrabarti K, Chakraborty A, Ghosh S. (2011). Effect of long-term fertilizers and manure application on microbial biomass and microbial activity of a tropical agricultural soil. Biology and Fertility of Soils 47: 227-233. ( Q1 , Impact Factor- 5.28)

Book Chapters
Rathnasamy, S. A., Gothandapani, S., Chellamuthu, S., Chakraborty, A., Gurusamy, D., & Roy, A. (2023). Omics Technologies Unraveling the Plant–Pathogen Interaction and Stress Response. In Genomics of Plant–Pathogen Interaction and the Stress Response (pp. 74-110). CRC Press.
Naidu, S., Suman, S., Roy, A., Chakraborty, A. , Singh, IK, & Singh, A. (2023). Impact of Genomics Tools and Techniques on Crop Improvement. In Genomics of Plant–Pathogen Interaction and the Stress Response (pp. 123-156). CRC Press.
Roy A. Chakraborty, A . (2021) Natural Insecticidal Proteins and Their Potential in Future IPM. In: Singh IK, Singh A. (eds) Plant-Pest Interactions: From Molecular Mechanisms to Chemical Ecology. Springer, Singapore. https://doi.org/10.1007/978-981-15-2467-7_12 . (pp. 265-303)
Chakraborty, A. , Roy A. (2021) Microbial Influence on Plant - Insect Interaction. In: Singh IK, Singh A. (eds) Plant-Pest Interactions: From Molecular Mechanisms to Chemical Ecology. Springer, Singapore. https://doi.org/10.1007/978-981-15-2467-7_14 . (pp. 337-363)

Článek v odborném periodiku

**YADAV, M. – **PANDEY, J. – CHAKRABORTY, A. – **HASSAN, M. – **KUNDU, J. – ROY, A. – **SINGH, I. – **SINGH, A. A Comprehensive Analysis of Calmodulin-Like Proteins of Glycine max Indicates Their Role in Calcium Signaling and Plant Defense Against Insect Attack. Frontiers in Plant Science, 2022, roč. 13, č. 2022, s. 1-18. ISSN: 1664-462X.

ZACHOVÁ, R. – GROSSE-WILDE, E. – **KROKENE, P. – ROY, A. – CHAKRABORTY, A. – **LOFSTEDT, C. – **VOGEL, H. – **ANDERSSON, M. – SCHLYTER, F. A highly-contiguous genome assembly of the Eurasian spruce bark beetle, Ips typographus, provides insight into a major forest pest. COMMUNICATIONS BIOLOGY, 2021, roč. 4, č. 1, s. 1-9. ISSN: 2399-3642.

CHAKRABORTY, A. – MODLINGER, R. – ASHRAF, M. – SYNEK, J. – SCHLYTER, F. – ROY, A. Core Mycobiome and Their Ecological Relevance in the Gut of FiveIpsBark Beetles (Coleoptera: Curculionidae: Scolytinae). Frontiers in Microbiology, 2020, roč. 11, č. 2020, s. 1-16. ISSN: 1664-302X.

**MEHTA, S. – CHAKRABORTY, A. – ROY, A. – **SINGH, I. – **SINGH, A. Fight Hard or Die Trying: Current Status of Lipid Signaling during Plant-Pathogen Interaction. Plants-BASEL, 2021, roč. 10, č. 6, s. 1-20. ISSN: 2223-7747.

**SINGH, A. – **MEHTA, S. – **YADAV, S. – **NAGAR, G. – **GHOSH, R. – ROY, A. – CHAKRABORTY, A. – **SINGH, I. How to Cope with the Challenges of Environmental Stresses in the Era of Global Climate Change: An Update on ROS Stave off in Plants. International Journal of Molecular Sciences, 2022, roč. 23, č. 4, s. 1-35. ISSN: 1422-0067.

**SINGH, S. – **SINGH, A. – **BAWEJA, V. – ROY, A. – CHAKRABORTY, A. – **SINGH, I. Molecular Rationale of Insect-Microbes Symbiosis-From Insect Behaviour to Mechanism. Microorganisms, 2021, roč. 9, č. 12, s. 1-22. ISSN: 2076-2607.

**MBARKI, S. – SKALICKÝ, M. – **TALBI, O. – CHAKRABORTY, A. – HNILIČKA, F. – HEJNÁK, V. – **ŽIVČÁK, M. – BRESTIČ, M. – **CERDA, A. – **ABDELLY, C. Performance of Medicago sativa Grown in Clay Soil Favored by Compost or Farmyard Manure to Mitigate Salt Stress. Agronomy, 2020, roč. 10, č. 1, s. 1-14. ISSN: 2073-4395.

**BHAR, A. – CHAKRABORTY, A. – ROY, A. Plant Responses to Biotic Stress: Old Memories Matter. Plants-BASEL, 2022, roč. 11, č. 1, s. 1-13. ISSN: 2223-7747.

SELLAMUTHU, G. – **AMIN, S. – BÍLÝ, J. – SYNEK, J. – MODLINGER, R. – SEN, M. – CHAKRABORTY, A. – ROY, A. Reference Gene Selection for Normalizing Gene Expression in Ips Sexdentatus (Coleoptera: Curculionidae: Scolytinae) Under Different Experimental Conditions. Frontiers in Physiology, 2021, roč. 12, č. October, s. 1-18. ISSN: 1664-042X.

SOUKUP, P. – VĚTROVSKÝ, T. – STIBLÍK, P. – VOTÝPKOVÁ, K. – CHAKRABORTY, A. – **SILLAM-DUSSES, D. – **KOLARIK, M. – **ODRIOZOLA, I. – **LO, N. – **BALDRIAN, P. – ŠOBOTNÍK, J. – BOURGUIGNON, T. Termites are associated with external species-specific bacterial communities. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2021, roč. , č. , s. 0-0. ISSN: 0099-2240.

VĚTROVSKÝ, T. – SOUKUP, P. – STIBLÍK, P. – VOTÝPKOVÁ, K. – CHAKRABORTY, A. – **LARRANAGA, I. – **SILLAM-DUSSES, D. – **LO, N. – BOURGUIGNON, T. – **BALDRIAN, P. – ŠOBOTNÍK, J. – **KOLARIK, M. Termites host specific fungal communities that differ from those in their ambient environments. Fungal Ecology, 2020, roč. 48, č. 2020, s. 1-12. ISSN: 1754-5048.

**HE, S. – **JIANG, B. – CHAKRABORTY, A. – **YU, G. The Evolution of Glycoside Hydrolase Family 1 in Insects Related to Their Adaptation to Plant Utilization. Insects, 2022, roč. 13, č. 9, s. 1-16. ISSN: 2075-4450.

CHAKRABORTY, A. – ASHRAF, M. – MODLINGER, R. – SYNEK, J. – SCHLYTER, F. – ROY, A. Unravelling the gut bacteriome of Ips (Coleoptera: Curculionidae: Scolytinae): identifying core bacterial assemblage and their ecological relevance. Scientific Reports, 2020, roč. 10, č. 1, s. 1-17. ISSN: 2045-2322.

CHAKRABORTY, A. – **MORI, B. – **REHERMANN, G. – **GARCIA, A. – **LEMMEN-LECHELT, J. – **HAGMAN, A. – **KHALIL, S. – **HAKANSSON, S. – **WITZGALL, P. – **BECHER, P. Yeast and fruit fly mutual niche construction and antagonism against mould. FUNCTIONAL ECOLOGY, 2022, roč. 36, č. 7, s. 1639-1654. ISSN: 0269-8463.

**LJUNGGREN, J. – **BORRERO-ECHEVERRY, F. – CHAKRABORTY, A. – **LINDBLOM, T. – **HEDENSTROM, E. – **KARLSSON, M. – **WITZGALL, P. – **BENGTSSON, M. Yeast Volatomes Differentially Affect Larval Feeding in an Insect Herbivore. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2019, roč. 85, č. 21, s. 1-16. ISSN: 0099-2240.

Kapitoly v odborné knize

CHAKRABORTY, A.; idPublikace = 85228; Název: Microbial Influence on Plant–Insect Interaction-- Neexistuje podtyp publikace --

CHAKRABORTY, A. Plant-Pest Interactions: From Molecular Mechanisms to Chemical Ecology.. : Springer Nature, 2021, 464s. ISBN 978-981-15-2467-7. Natural Insecticidal Proteins and Their Potential in Future IPM, s. 265-304.