Publikace

Publication List (Top 10 publications)

Gothandapani, S., Chakraborty, A., Vetukuri, R., Saravanasakthi,S., Roy, A. RNAi-biofungicides: a quantum leap for forest disease management Crit. Rev. Biotechnol. 1-28. https://doi.org/10.1080/07388551.2024.2430478
Khara, A., Chakraborty, A. #, Modlinger, R., Synek, J., & Roy, A. (2024). Comparative metagenomic study unveils new insights on bacterial communities in two pine-feeding Ips beetles (Coleoptera: Curculionidae: Scolytinae). Front. Microbiol., 15, 1400894. https://doi.org/10.3389/fmicb.2024.1400894 (#Corresponding author)
Chakraborty, A., Šobotník, J., Votýpková, K., Hradecký, J., Stiblik, P., Synek, J., ... & Větrovský, T. (2023). Impact of wood age on termite microbial assemblages. Appl. Environ. Microbiol., 89(5), e00361-23. https://doi.org/10.1128/aem.00361-23
Chakraborty A., Mori B., Rehermann G, Garcia A.H., Lemmen-Lechelt J.,…..Becher P. (2022) Yeast and fruit fly mutual niche construction and antagonism against mould. Func. Ecol. 36(7), 1639-1654 https://doi.org/10.1111/1365-2435.14054
Powell D., Groβe-Wilde E., Krokene P., Roy A., Chakraborty A., …., Schlyter F. (2021) A highly-contiguous genome assembly of the Eurasian spruce bark beetle, Ips typographus, provides insight into a major forest pest. Commun. Biol. 4, 1059. https://doi.org/10.1038/s42003-021-02602-3
Soukup P., Větrovský T., Stiblik P., Votýpková K., Chakraborty A., Sillam-Dussès D.,.... Šobotník J., Bourguignon T. (2021). Termites are associated with external species-specific bacterial communities. Appl. Environ. Microbiol. 87(2), e02042-20. https://doi.org/10.1128/AEM.02042-20
Chakraborty A., Ashraf MZ, Modlinger R., Synek J., Schlyter F., & Roy A. (2020). Unravelling the gut bacteriome of Ips (Coleoptera: Curculionidae: Scolytinae): identifying core bacterial assemblage and their ecological relevance. Sci. Rep. 10 (1), 1-17. https://doi.org/10.1038/s41598-020-75203-5
Chakraborty A., Modlinger R., Ashraf M. Z., Synek J., Schlyter F., & Roy A. (2020). Core mycobiome and their ecological relevance in the gut of five Ips bark beetles (Coleoptera: Curculionidae: Scolytinae). Front. Microbiol. 11, 2134. https://doi.org/10.3389/fmicb.2020.568853
Ljunggren J, Borrero-Echeverry F, Chakraborty, A., Lindblom T, Hedenström T, Karlsson M, Witzgall P, Bengtsson M. (2019). Yeast volatomes differentially effect larval feeding in an insect herbivore. Appl. Environ. Microbiol. 85(21), e01761-19 https://doi.org/10.1128/AEM.01761-19
Chakraborty A., Chakrabarti K., Chakraborty A., Ghosh S. (2011). Effect of long-term fertilizers and manure application on microbial biomass and microbial activity of a tropical agricultural soil. Biol. Fertil. Soils 47: 227-233. https://doi.org/10.1007/s00374-010-0509-1
Other Publications
Roy, A., Chakraborty, A., Quan Lu. Editorial: Forentomics – Forest Pest and Pathogen Biology, Ecology, and Management Using Omics Front. For. Glob. Change 8:1573774. https://doi.org/10.3389/ffgc.2025.1573774\
Sharan, S., Chakraborty, A., Roy, A., Singh, I.K., Singh, A. Transgenic Poplar for resistance against pest and pathogen attack in forests: an overview. Front. For. Glob. Change. 7, 1490562. https://doi.org/10.3389/ffgc.2024.1490562
Zádrapová, D*., Chakraborty, A.*#, Žáček, P., Korecký, J., Bhar, A., Roy, A. Exploring the Rhizospheric Microbial Communities under Long-Term Precipitation Regime in Norway Spruce Seed Orchard. Int. J. Mol. Sci. 2024, 25, 9658. https://doi.org/10.3390/ijms25179658 (* Equal contribution, # Corresponding author)
Roy, A., Waschke, N., Chattington, S., Modlinger, R., Chakraborty, A., Chirere, T. C., ... & Schlyter, F. (2024). Diet breadth in two polyphagous Spodoptera moths in a wide range of host and non-host plants and the potential for range expansion. bioRxiv, 2024-07. (pre-print) https://doi.org/10.1101/2024.07.25.605058
Wu, J., Tang, W., Li, Z., Chakraborty, A., Zhou, C., Li, F., & He, S. (2024). Duplications and Losses of the Detoxification Enzyme Glycosyltransferase 1 Are Related to Insect Adaptations to Plant Feeding. Int.J. Mol. Sci., 25(11), 6080. https://doi.org/10.3390/ijms25116080
Sellamuthu, G., Naseer, A., Hradecký, J., Chakraborty, A., Synek, J., Modlinger, R., & Roy, A. (2024). Gene expression plasticity facilitates different host feeding in Ips sexdentatus (Coleoptera: Curculionidae: Scolytinae). Insect Biochem. Mol. Biol., 165, 104061. https://doi.org/10.1016/j.ibmb.2023.104061
Chakraborty, A., Purohit, A., Khara, A., Modlinger, R., & Roy, A. (2023). Life-stage and geographic location determine the microbial assemblage in Eurasian spruce bark beetle, Ips typographus L.(Coleoptera: Curculionidae). Front. For. Glob. Change, 6, 1176160. https://doi.org/10.3389/ffgc.2023.1176160
He, S., Chakraborty, A., Li, F., Zhou, C., Zhang, B., Chen, B., & Jiang, B. (2023). Genome-wide identification reveals conserved carbohydrate-active enzyme repertoire in termites. Front. For. Glob. Change 6, 1240804. https://doi.org/10.3389/ffgc.2023.1240804
Yadav, M., Panwar, R., Rustagi, A., Chakraborty, A., Roy, A., Singh, I. K., & Singh, A. (2023). Comprehensive and evolutionary analysis of Spodoptera litura-inducible Cytochrome P450 monooxygenase gene family in Glycine max elucidate their role in defense. Front. Plant Sci., 14, 1221526. (Review article) https://doi.org/10.3389/fpls.2023.1221526
Chakraborty, A.#, Zádrapová, D., Dvořák, J., Faltinová, Z., Žáček, P., Cajthaml, T., ... & Roy, A. (2023). Impact of 30 years precipitation regime differences on forest soil physiology and microbial assemblages. Front. For. Glob. Change, 6, 1142979. https://doi.org/10.3389/ffgc.2023.1142979 (#Corresponding author)
Gupta, S. *, Chakraborty, A. *, & Roy, A. (2023). Prospects for deploying microbes against tree-killing beetles (Coleoptera) in Anthropocene. Front. For. Glob. Change, 6, 1182834. (Review article) https://doi.org/10.3389/ffgc.2023.1182834 (* Equal contribution)
Saxena, H., Negi, H., Keshan, R., Chitkara, P., Kumar, S., Chakraborty, A., ... & Singh, A. (2023). A comprehensive investigation of lipid-transfer proteins from Cicer arietinum disentangles their role in plant defense against Helicoverpa armigera infestation. Front. Genet., 14, 1195554. https://doi.org/10.3389/fgene.2023.1195554
Naidu, S., Pandey, J., Mishra, L. C., Chakraborty, A., Roy, A., Singh, I. K., & Singh, A. (2023). Silicon nanoparticles: Synthesis, uptake and their role in mitigation of biotic stress. Ecotoxicol. Environ. Saf., 255, 114783. https://doi.org/10.1016/j.ecoenv.2023.114783
Bhar, A., Chakraborty, A., & Roy, A. (2023). The captivating role of calcium in plant-microbe interaction. Front. Plant Sci.,14, 1138252. https://doi.org/10.3389/fpls.2023.1138252
Mogilicherla K., Chakraborty A., Smagghe G., Roy A. (2022) RNAi in termites (Isoptera): current status and prospects for pest management. Entomol. Gen. 43(1), 55-68 (Review article) https://doi.org/10.1127/entomologia/2022/1636
He S., Jiang B., Chakraborty A., Yu G. (2022) The evolution of glycoside hydrolase family 1 in insects related to their adaptation to plant utilization. Insects, 13(9), 786 https://doi.org/10.3390/insects13090786
Yadav, M., Pandey, J., Chakraborty, A., Hassan, M. I., Kundu, J. K., Roy, A., ... & Singh, A. (2022). A Comprehensive Analysis of Calmodulin-Like Proteins of Glycine max Indicates Their Role in Calcium Signaling and Plant Defense Against Insect Attack. Front. Plant Sci., 13, 817950 (Review article) https://doi.org/10.3389/fpls.2022.817950
Singh, A., Mehta, S., Yadav, S., Nagar, G., Ghosh, R., Roy, A., Chakraborty, A., & Singh, I. K. (2022). How to Cope with the Challenges of Environmental Stresses in the Era of Global Climate Change: An Update on ROS Stave off in Plants. Int.J. Mol. Sci., 23(4), 1995. (Review article) https://doi.org/10.3390/ijms23041995
Bhar, A*., Chakraborty, A. *, & Roy, A. (2021). Plant responses to biotic stress: Old memories matter. Plants, 11(1), 84. (* Equal contribution) (Review article) https://doi.org/10.3390/plants11010084
Sellamuthu G., Amin S., Bílý J., Synek J., Modlinger R., Sen M. K., Chakraborty A., & Roy A. (2021). Reference Gene Selection for Normalizing Gene Expression in Ips Sexdentatus (Coleoptera: Curculionidae: Scolytinae) Under Different Experimental Conditions. Front. Physiol, 12, 752768. https://doi.org/10.3389/fphys.2021.752768
Singh S., Singh A., Baweja V., Roy A., Chakraborty A., & Singh I.K. (2021). Molecular Rationale of Insect-Microbes Symbiosis—From Insect Behaviour to Mechanism. Microorganisms.; 9 (12): 2422. (Review article) https://doi.org/10.3390/microorganisms9122422
Mehta, S.*, Chakraborty A.,*, Roy, A., Singh, I. K., & Singh, A. (2021). Fight hard or die trying: current status of lipid signaling during plant–pathogen interaction. Plants, 10(6), 1098. (* Equal contribution) (Review article) https://doi.org/10.3390/plants10061098
Mbarki, S., Skalicky, M., Talbi, O., Chakraborty, A., Hnilicka, F., Hejnak, V., ... & Abdelly, C. (2020). Performance of Medicago sativa grown in clay soil favored by compost or farmyard manure to mitigate salt stress. Agronomy 10(1), 94. https://doi.org/10.3390/agronomy10010094
Becher P., Hagman A., Verschut V., Chakraborty A., Rozpedowska E., Lebreton S., …..& Piškur J. (2018). Chemical signaling and insect attraction is a conserved trait in yeasts. Ecol. Evol. 8 (5), 2962-2974 https://doi.org/10.1002/ece3.3905

Book Chapters

Rathnasamy, S. A., Gothandapani, S., Chellamuthu, S., Chakraborty, A., Gurusamy, D., & Roy, A. (2023). Omics technologies unravelling the plant–pathogen interaction and stress response. In Genomics of plant–pathogen interaction and the stress response (pp. 74-110). CRC Press. https://doi.org/10.1201/9781003153481
Naidu, S., Suman, S., Roy, A., Chakraborty, A., Singh, I. K., & Singh, A. (2023). Impact of Genomics Tools and Techniques on Crop Improvement. In Genomics of Plant–Pathogen Interaction and the Stress Response (pp. 123-156). CRC Press. https://doi.org/10.1201/9781003153481
Chakraborty A.#, Roy A. (2021) Microbial Influence on Plant–Insect Interaction. In: Singh I.K., Singh A. (eds) Plant-Pest Interactions: From Molecular Mechanisms to Chemical Ecology. Springer, Singapore. https://doi.org/10.1007/978-981-15-2467-7_14. (pp 337-363). (# Corresponding author)
Roy, A., Chakraborty, A. (2021). Natural Insecticidal Proteins and Their Potential in Future IPM. In: Singh I.K., Singh A. (eds) Plant-Pest Interactions: From Molecular Mechanisms to Chemical Ecology. Springer, Singapore. https://doi.org/10.1007/978-981-15-2467-7_12. (pp. 265-303).